PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA92G00007
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 411aa    MW: 46148.1 Da    PI: 6.9415
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA92G00007genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.3e-11120148533
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                 k  rr+++NReAAr+sR+RKka++++Le 
  AA92G00007 120 KTLRRLAQNREAARKSRLRKKAYVQQLES 148
                 7789***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-9110164No hitNo description
SMARTSM003381.8E-8116198IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737118162IPR004827Basic-leucine zipper domain
PfamPF001708.3E-8120150IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.3E-7120161No hitNo description
CDDcd147081.76E-23120172No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
PfamPF141447.2E-30207281IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MQGHHQNHHQ HISSSSTSAT TSHGNFMNKD VGGSYDLGDI DPSLFLYLDG QGHQDPAPSH  60
VPHHHTIQNL AMRPPTSTLN IFPSQPMHVD LPPSTTSMKE VNRKGPSPSD HDTPKSSDPK  120
TLRRLAQNRE AARKSRLRKK AYVQQLESCR IKLTQLEQEI QRARSQGVFF GGDQHGGVGI  180
GPGNISNEAA MFDMEYGRWL EEQQRLLEEL RVAAQEHLPE NELRMYVDTC LAHYDHLINL  240
KAMVAKTDVF HLISGAWKTP AERCFLWMAG FRPSDIIKVI VNQIEPLTEQ QIVGICALQQ  300
STQEAEDALS QGLESLNQSL SDTILSDTLT LSPLPPHLSN FMSHMSLALN KLSSLEGFVL  360
QADNLRHQTL HRLNQLLTTR QEARCLLAVA EYFHRLQALS SLWLARPRQD G
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006290099.10.0hypothetical protein CARUB_v10003744mg
SwissprotQ415581e-120HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLR0FKQ20.0R0FKQ2_9BRAS; Uncharacterized protein
STRINGfgenesh2_kg.6__632__AT5G06839.20.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.10.0bZIP family protein